Symptoms
When you remove a BizTalk application by using either BizTalk Server Administration Console or BtsTask Remove –ApplicationName:<application name> command line in Microsoft BizTalk Server 2010 or BizTalk Server 2009, the tracking settings of the following two default pipelines are unexpectedly discarded:
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Microsoft.BizTalk.DefaultPipelines.PassThruTransmit
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Microsoft.BizTalk.DefaultPipelines.PassThruReceive
For example, assume that you enable Port start and end events and Message send and receive events tracking settings for the PassThruTransmit pipeline in a BizTalk application. When you remove a BizTalk application, the two tracking settings are discarded.
Resolution
Cumulative update information
BizTalk Server 2009
The hotfix that resolves this issue is included in cumulative update package 7 for BizTalk Server 2009.
For more information about how to obtain the cumulative update package, see Cumulative update package 7 for BizTalk Server 2009.
BizTalk Server 2010
The hotfix that resolves this issue is included in cumulative update package 6 for BizTalk Server 2010.
For more information about how to obtain the cumulative update package, see Cumulative update package 6 for BizTalk Server 2010.
Status
Microsoft has confirmed that this is a problem in the Microsoft products that are listed in the "Applies to" section.
